Israel holds the Islamist Palestinian movement Hamas responsible for any fire coming from the blockaded coastal enclave.
The Israeli army responds automatically to any strikes on its territory, generally targeting Hamas facilities.
Hamas’s armed wing, the Ezzedine al-Qassam Brigades, in a statement said they had fired at the Israeli jets overhead.
But Israeli army spokesman, Lieutenant Colonel Jonathan Conricus, said there was no truth to the claim.
Hamas and Israel have fought three wars since 2008, and the last conflict in 2014 was waged in part over tunnels from Gaza that were used to launch attacks.
Israeli aircraft hit Hamas targets in the southern Gaza Strip repeatedly in early February, after it said Palestinians there fired a rocket into the Jewish state.
Tensions between the Palestinians and Israel have been high since US President Donald Trump recognised Jerusalem as the capital of the Jewish state in December.
Netanyahu will visit the White House next month, a senior US administration official told AFP on Friday.
The March 5 visit comes after a war of words between close allies Israel and the US over settlements, and a scandal that has seen police recommend Netanyahu be indicted for graft.